Schedule
Genome Phylogenies and Dynamics
| 9:00 |
Eric Alm |
The Phylogenomic Landscapes of Genes are Shallow |
| 9:30 |
Csaba Pal |
Evolution of minimal metabolic networks |
| 10:00 |
Cristos Ouzounis |
Quantifying vertical and horizontal gene flow across species and time |
Comparative, Population, and Environmental Genomics
| 11:00 |
Manolis Kellis |
Computational Comparative Genomics: Genes, Regulation, Evolution |
| 11:30 |
Dawn Field |
Large-scale Comparative Genomic Ranking of Taxonomically Restricted Genes (TRGs) in Bacterial and Archaeal Genomes using the “Quality Index for Predicted Proteins” (QIPP) |
| 1:00 |
Edward Feil |
Weakened selection and shifting patterns of polymorphism in Shigella |
| 1:30 |
Patrick Schloss |
Developing a statistical toolbox to describe and compare communities using metagenomic sequences |
Elucidation of Gene Regulation in Microbes
| 2:00 |
Mikhail Gelfand |
Evolution of bacterial regulatory systems |
| 2:30 |
Erik van Nimwegen |
Comparative genomic inference of bacterial regulatory systems |
| 3:00 |
Richard Bonneau |
Learning global transcriptional dynamics with the Inferelator and cMonkey |
Computational Tools and Databases for Microbial Analysis
| 4:00 |
Andrei Osterman |
Genomic Reconstruction and Experimental Assessment of Metabolic Subsystems in Bacteria |
| 4:30 |
Natalia Maltsev |
Evolutionary analysis of genomes and gene networks from taxonomic and phenotypic perspective |
| 5:00 |
Dmitrij Frishman |
Software tools for high-throughput genome annotation |
| 5:30 |
Peter Karp |
The BioCyc Collection of 260+ Pathway/Genome Databases |
| 6:00 |
Tatiana Tatusov |
Microbial Genome Resources at NCBI |
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